Article ID: CBB001221587

The Roles of Integration in Molecular Systems Biology (2012)

unapi

O'Malley, Maureen A. (Author)
Soyer, Orkun S. (Author)


Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences
Volume: 43
Pages: 58--68


Publication Date: 2012
Edition Details: Part of a special section: “Data-Driven Research in the Biological and Biomedical Sciences”
Language: English

A common way to think about scientific practice involves classifying it as hypothesis- or data-driven. We argue that although such distinctions might illuminate scientific practice very generally, they are not sufficient to understand the day-to-day dynamics of scientific activity and the development of programmes of research. One aspect of everyday scientific practice that is beginning to gain more attention is integration. This paper outlines what is meant by this term and how it has been discussed from scientific and philosophical points of view. We focus on methodological, data and explanatory integration, and show how they are connected. Then, using some examples from molecular systems biology, we will show how integration works in a range of inquiries to generate surprising insights and even new fields of research. From these examples we try to gain a broader perspective on integration in relation to the contexts of inquiry in which it is implemented. In today's environment of data-intensive large-scale science, integration has become both a practical and normative requirement with corresponding implications for meta-methodological accounts of scientific practice. We conclude with a discussion of why an understanding of integration and its dynamics is useful for philosophy of science and scientific practice in general.

...More
Included in

Article Leonelli, S. (2012) Introduction: Making Sense of Data-Driven Research in the Biological and Biomedical Sciences. Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences (p. 1). unapi

Citation URI
https://data.isiscb.org/isis/citation/CBB001221587/

Similar Citations

Article Keating, Peter; Cambrosio, Alberto; (2012)
Too Many Numbers: Microarrays in Clinical Cancer Research (/isis/citation/CBB001221585/)

Article Leonelli, Sabina; Ankeny, Rachel A.; (2012)
Re-Thinking Organisms: The Impact of Databases on Model Organism Biology (/isis/citation/CBB001221584/)

Article Fridolin Gross; Nina Kranke; Robert Meunier; (2019)
Pluralization Through Epistemic Competition: Scientific Change in Times of Data-Intensive Biology (/isis/citation/CBB374064986/)

Article Krohs, Ulrich; (2012)
Convenience Experimentation (/isis/citation/CBB001221586/)

Chapter Leonelli, Sabina; (2011)
Packaging Small Facts for Re-Use: Databases in Model Organism Biology (/isis/citation/CBB001000235/)

Book Sara Green; (2016)
Philosophy of Systems Biology: Perspectives from Scientists and Philosophers (/isis/citation/CBB545077792/)

Article Miles MacLeod; Nancy J. Nersessian; (2015)
Modeling systems-level dynamics: Understanding without mechanistic explanation in integrative systems biology (/isis/citation/CBB511081415/)

Article Green, Sara; Wolkenhauer, Olaf; (2013)
Tracing Organizing Principles: Learning from the History of Systems Biology (/isis/citation/CBB001420760/)

Book Hallam Stevens; Sarah S. Richardson; (2015)
Postgenomics: Perspectives on Biology after the Genome (/isis/citation/CBB862623870/)

Book Ben Martynoga; (2018)
Molecular Tinkering: The Edinburgh Scientists Who Changed the Face of Modern Biology (/isis/citation/CBB777108676/)

Article Tahani Nadim; (2016)
Data Labours: How the Sequence Databases GenBank and EMBL-Bank Make Data (/isis/citation/CBB311562850/)

Book Stevens, Hallam; (2013)
Life out of Sequence: A Data-Driven History of Bioinformatics (/isis/citation/CBB001213157/)

Article Wennerström, Frida; Dubois, Anna; (2004)
Organising Research Interaction: A Case Study of a Research Project in Bioinformatics (/isis/citation/CBB000770379/)

Authors & Contributors
Stevens, Hallam
Leonelli, Sabina
Green, Sara
Kranke, Nina
Nadim, Tahani
Martynoga, Ben
Journals
Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences
History and Philosophy of the Life Sciences
Science as Culture
Lychnos
Journal of the History of Biology
Berichte zur Wissenschaftsgeschichte
Publishers
Troubador Publishing
University of Chicago Press
Springer
Duke University Press
Concepts
Data analysis
Bioinformatics
Biology
Systems biology
Molecular biology
Databases
People
Woese, Carl R.
Dayhoff, Margaret O.
Time Periods
20th century, late
21st century
20th century
Places
Edinburgh
United States
Great Britain
Institutions
GenBank
European Molecular Biology Laboratory (EMBL)
Cambridge. University. Laboratory of Molecular Biology
Human Genome Project
Comments

Be the first to comment!

{{ comment.created_by.username }} on {{ comment.created_on | date:'medium' }}

Log in or register to comment